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LOC6619628 beta-1,4-galactosyltransferase 7 [ Drosophila sechellia ]

Gene ID: 6619628, updated on 10-May-2024

Summary

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Gene symbol
LOC6619628
Gene description
beta-1,4-galactosyltransferase 7
Locus tag
Dsec_GM17784
See related
EnsemblRapid:LOC6619628
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM17784; GM17785; b4Gal-T7; GM17784-PA; GM17785-PA; beta4GalT7
Orthologs
fruit fly all
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Genomic context

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See LOC6619628 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (23570032..23571237)

Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase Nek8-like Neighboring gene titin Neighboring gene ER membrane protein complex subunit 6 Neighboring gene Nuclear hormone receptor HR96 Neighboring gene Smg6 nonsense mediated mRNA decay factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045952.1 Chromosome 3R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of key functional residues in the active site of human {beta}1,4-galactosyltransferase 7: a major enzyme in the glycosaminoglycan synthesis pathway. Talhaoui I, et al. J Biol Chem, 2010 Nov 26. PMID 20843813, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7
Names
Dsec\GM17784
Dsec\GM17784-PA
Dsec\GM17785
Dsec\GM17785-PA
Dsec\beta4GalT7
Dsec\beta4GalT7-PA
beta1,4-galactosyltransferase 7
beta4Gal-T7
beta4GalT7-PA
dsec_GLEANR_19277
dsec_GLEANR_19278

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045952.1 Reference ASM438219v1

    Range
    23570032..23571237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002043807.2 → XP_002043843.2  beta-1,4-galactosyltransferase 7

    UniProtKB/TrEMBL
    Q2HPP0
    Related
    XP_002043843.2, XM_002043807.2
    Conserved Domains (1) summary
    cd00899
    Location:74 → 298
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein Strain
Heading Accession and Version

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