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Hmr Hybrid male rescue [ Drosophila sechellia ]

Gene ID: 6617567, updated on 22-May-2024

Summary

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Gene symbol
Hmr
Gene description
Hybrid male rescue
Locus tag
Dsec_GM11301
See related
EnsemblRapid:LOC6617567
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Hmr-PA; GM11301; GM11302; GM19605; Dsec\Hmr; GM11301-PA; GM11302-PA; GM19605-PA
Orthologs
fruit fly all
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Genomic context

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See Hmr in Genome Data Viewer
Location:
chromosome: X
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) X NC_045954.1 (10367887..10385238, complement)

Chromosome X - NC_045954.1Genomic Context describing neighboring genes Neighboring gene Src homology 2 domain-containing protein sprint Neighboring gene uncharacterized LOC116802215 Neighboring gene GTP-binding protein YPTM2 Neighboring gene GTP-binding protein YPTM2-like Neighboring gene FAST kinase domain-containing protein 5, mitochondrial Neighboring gene mitochondrial ornithine transporter 1 Neighboring gene uncharacterized LOC6617571

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045954.1 Chromosome X Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A rapidly evolving MYB-related protein causes species isolation in Drosophila. Barbash DA, et al. Proc Natl Acad Sci U S A, 2003 Apr 29. PMID 12695567, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC6617567
Names
Dsec\GM11301
Dsec\GM11301-PA
Dsec\GM11302
Dsec\GM11302-PA
Dsec\GM19605
Dsec\GM19605-PA
Dsec\Hmr-PA
dsec_GLEANR_11538
dsec_GLEANR_11539
dsec_GLEANR_2245

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045954.1 Reference ASM438219v1

    Range
    10367887..10385238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032725967.1 → XP_032581858.1  uncharacterized protein LOC6617567 isoform X1

    UniProtKB/TrEMBL
    B8X396
    Related
    XP_032581858.1, XM_032725967.1
    Conserved Domains (3) summary
    smart00595
    Location:215 → 297
    MADF; subfamily of SANT domain
    PHA03247
    Location:553 → 875
    PHA03247; large tegument protein UL36; Provisional
    pfam10545
    Location:59 → 150
    MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

  2. XM_032725968.1 → XP_032581859.1  uncharacterized protein LOC6617567 isoform X2

    UniProtKB/TrEMBL
    B8X396, Q86CW3
    Related
    XP_032581859.1, XM_032725968.1
    Conserved Domains (3) summary
    smart00595
    Location:215 → 297
    MADF; subfamily of SANT domain
    PHA03247
    Location:553 → 875
    PHA03247; large tegument protein UL36; Provisional
    pfam10545
    Location:59 → 150
    MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like

RNA

  1. XR_004362576.1 RNA Sequence

    Related
    XR_004362576.1
Nucleotide Protein Strain
Heading Accession and Version

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