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Csp Cysteine string protein [ Drosophila sechellia ]

Gene ID: 6616546, updated on 22-May-2024

Summary

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Gene symbol
Csp
Gene description
Cysteine string protein
Locus tag
Dsec_GM22437
See related
EnsemblRapid:LOC6616546
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM22437; GM22437-PA
Orthologs
fruit fly all
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Genomic context

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See Csp in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3L NC_045951.1 (21725297..21731551)

Chromosome 3L - NC_045951.1Genomic Context describing neighboring genes Neighboring gene guanine nucleotide exchange factor subunit Rich Neighboring gene GSK3-beta interaction protein Neighboring gene ATP-dependent RNA helicase Ddx1 Neighboring gene uncharacterized LOC116801148 Neighboring gene Serine-arginine protein kinase at 79D Neighboring gene Nck associated protein 1 Hem

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045951.1 Chromosome 3L Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in type Is terminal bouton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 5 homolog
Names
Dsec\GM22437
Dsec\GM22437-PA
dsec_GLEANR_5210

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045951.1 Reference ASM438219v1

    Range
    21725297..21731551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002040869.2 → XP_002040905.1  dnaJ homolog subfamily C member 5 homolog isoform X1

    See identical proteins and their annotated locations for XP_002040905.1

    UniProtKB/TrEMBL
    B4IAZ5
    Related
    XP_002040905.1, XM_002040869.2
    Conserved Domains (1) summary
    pfam00226
    Location:17 → 79
    DnaJ; DnaJ domain

  2. XM_032719006.1 → XP_032574897.1  dnaJ homolog subfamily C member 5 homolog isoform X2

    Related
    XP_032574897.1, XM_032719006.1
    Conserved Domains (1) summary
    pfam00226
    Location:17 → 79
    DnaJ; DnaJ domain
Nucleotide Protein Strain
Heading Accession and Version

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