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Polr3E RNA polymerase III subunit E [ Drosophila sechellia ]

Gene ID: 6616391, updated on 15-May-2024

Summary

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Gene symbol
Polr3E
Gene description
RNA polymerase III subunit E
Locus tag
Dsec_GM22337
See related
EnsemblRapid:LOC6616391
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM22337; GM22337-PA
Orthologs
fruit fly all
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Genomic context

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See Polr3E in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3L NC_045951.1 (20516979..20518722)

Chromosome 3L - NC_045951.1Genomic Context describing neighboring genes Neighboring gene methyltransferase-like protein 22 Neighboring gene cancer-related nucleoside-triphosphatase homolog Neighboring gene Decaprenyl diphosphate synthase subunit 2 Neighboring gene Brefeldin-resistant Arf-GEF family protein schizo Neighboring gene uncharacterized LOC116801237 Neighboring gene Stork-head domain-containing protein knockout Neighboring gene uncharacterized LOC116801236

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045951.1 Chromosome 3L Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC5
Names
Dsec\GM22337
Dsec\GM22337-PA
dsec_GLEANR_5119

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045951.1 Reference ASM438219v1

    Range
    20516979..20518722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002040715.2 → XP_002040751.1  DNA-directed RNA polymerase III subunit RPC5

    See identical proteins and their annotated locations for XP_002040751.1

    UniProtKB/TrEMBL
    B4IAJ1
    Related
    XP_002040751.1, XM_002040715.2
    Conserved Domains (1) summary
    pfam04801
    Location:4 → 444
    Sin_N; Sin-like protein conserved region
Nucleotide Protein Strain
Heading Accession and Version

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