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Edem1 ER degradation-enhancing alpha-mannosidase-like protein 2 [ Drosophila sechellia ]

Gene ID: 6616054, updated on 15-May-2024

Summary

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Gene symbol
Edem1
Gene description
ER degradation-enhancing alpha-mannosidase-like protein 2
Locus tag
Dsec_GM18936
See related
EnsemblRapid:LOC6616054
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM18936; GM18936-PA
Orthologs
fruit fly all
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Genomic context

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See Edem1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) X NC_045954.1 (1828183..1831941, complement)

Chromosome X - NC_045954.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6616053 Neighboring gene Lipid droplet assembly factor 1 Neighboring gene Myb-interacting protein 130 Neighboring gene WD repeat-containing protein Rbcn-3B Neighboring gene eukaryotic translation initiation factor 2B subunit epsilon

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045954.1 Chromosome X Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum mannose trimming IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ER degradation-enhancing alpha-mannosidase-like protein 2
Names
Dsec\GM18936
Dsec\GM18936-PA
dsec_GLEANR_20546

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045954.1 Reference ASM438219v1

    Range
    1828183..1831941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002040384.2 → XP_002040420.1  ER degradation-enhancing alpha-mannosidase-like protein 2

    See identical proteins and their annotated locations for XP_002040420.1

    UniProtKB/TrEMBL
    B4I9L0
    Related
    XP_002040420.1, XM_002040384.2
    Conserved Domains (1) summary
    pfam01532
    Location:48 → 486
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein Strain
Heading Accession and Version

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