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Tmtc3 Transmembrane O-mannosyltransferase targeting cadherins 3 [ Drosophila sechellia ]

Gene ID: 6615306, updated on 15-May-2024

Summary

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Gene symbol
Tmtc3
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 3
Locus tag
Dsec_GM15749
See related
EnsemblRapid:LOC6615306
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM15749; GM15749-PA
Orthologs
fruit fly all
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Genomic context

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See Tmtc3 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (17162019..17166740, complement)

Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene TWiK family of potassium channels protein 7 Neighboring gene probable H/ACA ribonucleoprotein complex subunit 1 Neighboring gene Tub domain-containing protein ktub Neighboring gene glycerophosphocholine phosphodiesterase GPCPD1 Neighboring gene membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 Neighboring gene mago, exon junction complex subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045950.1 Chromosome 2R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase Tmtc3
Names
Dsec\GM15749
Dsec\GM15749-PA
dsec_GLEANR_16565

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045950.1 Reference ASM438219v1

    Range
    17162019..17166740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002039674.2 → XP_002039710.1  protein O-mannosyl-transferase Tmtc3

    See identical proteins and their annotated locations for XP_002039710.1

    UniProtKB/TrEMBL
    B4I7K0
    Related
    XP_002039710.1, XM_002039674.2
    Conserved Domains (6) summary
    COG0457
    Location:527 → 824
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:598 → 625
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:665 → 698
    TPR_1; Tetratricopeptide repeat
    pfam08409
    Location:323 → 396
    DUF1736; Domain of unknown function (DUF1736)
    pfam13181
    Location:631 → 663
    TPR_8; Tetratricopeptide repeat
    pfam13414
    Location:807 → 870
    TPR_11; TPR repeat
Nucleotide Protein Strain
Heading Accession and Version

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