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Pgant5 polypeptide N-acetylgalactosaminyltransferase 5 [ Drosophila sechellia ]

Gene ID: 6613446, updated on 24-May-2024

Summary

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Gene symbol
Pgant5
Gene description
polypeptide N-acetylgalactosaminyltransferase 5
Locus tag
Dsec_GM18035
See related
EnsemblRapid:LOC6613446
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM18035; GM18035-PA
Orthologs
fruit fly all
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Genomic context

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See Pgant5 in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 2L NC_045949.1 (4982992..5004184, complement)

Chromosome 2L - NC_045949.1Genomic Context describing neighboring genes Neighboring gene protein Hook homolog 1 Neighboring gene ribosomal protein L37A Neighboring gene 4'-phosphopantetheine phosphatase Neighboring gene uncharacterized LOC6613448

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045949.1 Chromosome 2L Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 5
Names
Dsec\GM18035
Dsec\GM18035-PA
dsec_GLEANR_19538

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045949.1 Reference ASM438219v1

    Range
    4982992..5004184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032713980.1 → XP_032569871.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    B4I1D1
    Related
    XP_032569871.1, XM_032713980.1
    Conserved Domains (2) summary
    cd02510
    Location:190 → 490
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:503 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_032713987.1 → XP_032569878.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X2

    Related
    XP_032569878.1, XM_032713987.1
    Conserved Domains (2) summary
    cd02510
    Location:190 → 490
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:503 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_032713973.1 → XP_032569864.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    B4I1D1
    Related
    XP_032569864.1, XM_032713973.1
    Conserved Domains (2) summary
    cd02510
    Location:190 → 490
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:503 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_032713978.1 → XP_032569869.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    B4I1D1
    Related
    XP_032569869.1, XM_032713978.1
    Conserved Domains (2) summary
    cd02510
    Location:190 → 490
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:503 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_002037884.2 → XP_002037920.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    B4I1D1
    Related
    XP_002037920.1, XM_002037884.2
    Conserved Domains (2) summary
    cd02510
    Location:190 → 490
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:503 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein Strain
Heading Accession and Version

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