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LOC6612798 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [ Drosophila sechellia ]

Gene ID: 6612798, updated on 10-May-2024

Summary

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Gene symbol
LOC6612798
Gene description
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Locus tag
Dsec_GM12193
See related
EnsemblRapid:LOC6612798
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM12193; GM12193-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6612798 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3R NC_045952.1 (28441886..28448554, complement)

Chromosome 3R - NC_045952.1Genomic Context describing neighboring genes Neighboring gene nucleoplasmin-like protein Neighboring gene sodium-independent sulfate anion transporter Neighboring gene 4-hydroxybutyrate coenzyme A transferase Neighboring gene axin Neighboring gene sex-regulated protein janus-B Neighboring gene Zinc-finger protein interacting with CP190

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045952.1 Chromosome 3R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Names
Dsec\GM12193
Dsec\GM12193-PA
dsec_GLEANR_12620

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045952.1 Reference ASM438219v1

    Range
    28441886..28448554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032721730.1 → XP_032577621.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    B4HZK1
    Related
    XP_032577621.1, XM_032721730.1
    Conserved Domains (1) summary
    pfam05060
    Location:129 → 600
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  2. XM_032721731.1 → XP_032577622.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X2

    Related
    XP_032577622.1, XM_032721731.1
    Conserved Domains (1) summary
    pfam05060
    Location:129 → 501
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  3. XM_032721732.1 → XP_032577623.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X3

    UniProtKB/TrEMBL
    B4HZK1
    Related
    XP_032577623.1, XM_032721732.1
    Conserved Domains (1) summary
    pfam05060
    Location:129 → 480
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials