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LOC6612533 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I [ Drosophila sechellia ]

Gene ID: 6612533, updated on 10-May-2024

Summary

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Gene symbol
LOC6612533
Gene description
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I
Locus tag
Dsec_GM12328
See related
EnsemblRapid:LOC6612533
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM12328; GM12329; GM12328-PA; GM12329-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6612533 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) X NC_045954.1 (3908775..3910370)

Chromosome X - NC_045954.1Genomic Context describing neighboring genes Neighboring gene platelet binding protein GspB Neighboring gene Histone acetyltransferase Tip60 Neighboring gene dim gamma-tubulin 4 Neighboring gene fasciclin-2 Neighboring gene uncharacterized LOC6612530

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045954.1 Chromosome X Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I
Names
Dsec\GM12328
Dsec\GM12328-PA
Dsec\GM12329
Dsec\GM12329-PA
dsec_GLEANR_12748
dsec_GLEANR_12749

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045954.1 Reference ASM438219v1

    Range
    3908775..3910370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002037005.2 → XP_002037041.2  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I

    Related
    XP_002037041.2, XM_002037005.2
    Conserved Domains (1) summary
    cd00218
    Location:50 → 284
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials