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Pgant35A polypeptide N-acetylgalactosaminyltransferase 35A [ Drosophila sechellia ]

Gene ID: 6611268, updated on 24-May-2024

Summary

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Gene symbol
Pgant35A
Gene description
polypeptide N-acetylgalactosaminyltransferase 35A
Locus tag
Dsec_GM15572
See related
EnsemblRapid:LOC6611268
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM15572; GM15572-PA
Orthologs
fruit fly all
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Genomic context

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See Pgant35A in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 2L NC_045949.1 (14047757..14049877)

Chromosome 2L - NC_045949.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6611265 Neighboring gene lethal (2) 34Fd Neighboring gene RAS oncogene family member Rab14 Neighboring gene DNA mismatch repair protein spel1 Neighboring gene pickpocket protein 28

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045949.1 Chromosome 2L Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 35A
Names
Dsec\GM15572
Dsec\GM15572-PA
dsec_GLEANR_1640

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045949.1 Reference ASM438219v1

    Range
    14047757..14049877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032727854.1 → XP_032583745.1  polypeptide N-acetylgalactosaminyltransferase 35A

    UniProtKB/TrEMBL
    B4HXG6
    Related
    XP_032583745.1, XM_032727854.1
    Conserved Domains (2) summary
    cd02510
    Location:154 → 453
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    smart00458
    Location:492 → 604
    RICIN; Ricin-type beta-trefoil
Nucleotide Protein Strain
Heading Accession and Version

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