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CtBP C-terminal Binding Protein [ Tribolium castaneum (red flour beetle) ]

Gene ID: 660954, updated on 6-Jun-2024

Summary

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Gene symbol
CtBP
Gene description
C-terminal Binding Protein
Locus tag
TcasGA2_TC012453
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See CtBP in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 2 NC_087395.1 (17856044..17868214)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG9 NC_007424.3 (7720516..7733046)

Chromosome 2 - NC_087395.1Genomic Context describing neighboring genes Neighboring gene heme transporter FLVCR2 Neighboring gene mitochondrial enolase superfamily member 1 Neighboring gene Chromosome transmission fidelity 4 Neighboring gene solute carrier family 2, facilitated glucose transporter member 2 Neighboring gene myoblast city Neighboring gene dynactin subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein
Names
AUGUSTUS-3.0.2_12453
C-terminal-binding protein-like Protein
GLEAN_12453

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087395.1 Reference icTriCast1.1 Primary Assembly

    Range
    17856044..17868214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008199638.3 → XP_008197860.1  C-terminal-binding protein isoform X3

    UniProtKB/TrEMBL
    D6X2E0
    Conserved Domains (1) summary
    cd05299
    Location:29 → 347
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_064355115.1 → XP_064211185.1  C-terminal-binding protein isoform X4

    UniProtKB/TrEMBL
    D6X2E0

  3. XM_008199637.3 → XP_008197859.1  C-terminal-binding protein isoform X1

    UniProtKB/TrEMBL
    D6X2E0
    Conserved Domains (1) summary
    cd05299
    Location:29 → 347
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_967148.5 → XP_972241.1  C-terminal-binding protein isoform X2

    See identical proteins and their annotated locations for XP_972241.1

    UniProtKB/TrEMBL
    D6X2E0
    Conserved Domains (1) summary
    cd05299
    Location:29 → 347
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein Strain
Heading Accession and Version

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