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LOC6609358 transcription factor grauzone [ Drosophila sechellia ]

Gene ID: 6609358, updated on 10-May-2024

Summary

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Gene symbol
LOC6609358
Gene description
transcription factor grauzone
Locus tag
Dsec_GM20099
See related
EnsemblRapid:LOC6609358
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM20099; GM20099-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6609358 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (12088531..12090564, complement)

Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene ATP-citrate synthase Neighboring gene Transmembrane protein 131 Neighboring gene monocarboxylate transporter 12 Neighboring gene Ubiquitin-fold modifier conjugating enzyme 1 Neighboring gene proteasome beta1 subunit Neighboring gene exosome complex component Rrp42 Neighboring gene ER membrane protein complex subunit 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045950.1 Chromosome 2R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor grauzone
Names
Dsec\GM20099
Dsec\GM20099-PA
dsec_GLEANR_2920

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045950.1 Reference ASM438219v1

    Range
    12088531..12090564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002034011.2 → XP_002034047.1  transcription factor grauzone

    See identical proteins and their annotated locations for XP_002034047.1

    UniProtKB/TrEMBL
    B4HSI2
    Related
    XP_002034047.1, XM_002034011.2
    Conserved Domains (2) summary
    sd00017
    Location:439 → 460
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam07776
    Location:3 → 76
    zf-AD; Zinc-finger associated domain (zf-AD)
Nucleotide Protein Strain
Heading Accession and Version

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