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LOC6608758 S-phase kinase-associated protein 1 [ Drosophila sechellia ]

Gene ID: 6608758, updated on 10-May-2024

Summary

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Gene symbol
LOC6608758
Gene description
S-phase kinase-associated protein 1
Locus tag
Dsec_GM20386
See related
EnsemblRapid:LOC6608758
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM20386; GM20386-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6608758 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (8296174..8297143, complement)

Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6608755 Neighboring gene uncharacterized LOC6608757 Neighboring gene SET and MYND domain containing, class 4, member 4 Neighboring gene Organic solute carrier partner 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045950.1 Chromosome 2R Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cullin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
S-phase kinase-associated protein 1
Names
Dsec\GM20386
Dsec\GM20386-PA
dsec_GLEANR_3209

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045950.1 Reference ASM438219v1

    Range
    8296174..8297143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002033445.2 → XP_002033481.1  S-phase kinase-associated protein 1

    See identical proteins and their annotated locations for XP_002033481.1

    UniProtKB/TrEMBL
    B4HNX9
    Related
    XP_002033481.1, XM_002033445.2
    Conserved Domains (3) summary
    smart00512
    Location:1 → 110
    Skp1; Found in Skp1 protein family
    COG5201
    Location:1 → 161
    SKP1; SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
    pfam01466
    Location:84 → 158
    Skp1; Skp1 family, dimerization domain
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials