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LOC6604796 UBX domain-containing protein 1 [ Drosophila sechellia ]

Gene ID: 6604796, updated on 10-May-2024

Summary

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Gene symbol
LOC6604796
Gene description
UBX domain-containing protein 1
Locus tag
Dsec_GM25009
See related
EnsemblRapid:LOC6604796
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila sechellia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GM25009; GM25009-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6604796 in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM438219v1 (GCF_004382195.1) 3L NC_045951.1 (7814906..7816267)

Chromosome 3L - NC_045951.1Genomic Context describing neighboring genes Neighboring gene ribonuclease Oy Neighboring gene UBX domain-containing protein 4 Neighboring gene Heterochromatin protein 4 Neighboring gene ribonuclease P/MRP subunit POP4 Neighboring gene serine/threonine-protein kinase nemo Neighboring gene transfer RNA alanine (anticodon AGC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045951.1 Chromosome 3L Reference ASM438219v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 1
Names
Dsec\GM25009
Dsec\GM25009-PA
dsec_GLEANR_7992

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM438219v1

Genomic

  1. NC_045951.1 Reference ASM438219v1

    Range
    7814906..7816267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002029611.2 → XP_002029647.1  UBX domain-containing protein 1

    See identical proteins and their annotated locations for XP_002029647.1

    UniProtKB/TrEMBL
    B4HIX9
    Related
    XP_002029647.1, XM_002029611.2
    Conserved Domains (3) summary
    PRK05035
    Location:122 → 222
    PRK05035; electron transport complex protein RnfC; Provisional
    cd14302
    Location:2 → 42
    UBA_UBXN1; UBA domain found in UBX domain-containing protein 1 (UBXN1) and similar proteins
    cd01772
    Location:248 → 327
    UBX_UBXN1; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 1 (UBXN1) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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