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Pgant1 Polypeptide N-Acetylgalactosaminyltransferase 1 [ Drosophila persimilis ]

Gene ID: 6602111, updated on 24-May-2024

Summary

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Gene symbol
Pgant1
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 1
Locus tag
Dper_GL20074
See related
EnsemblRapid:LOC6602111
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL20074; GL20074-PA
Orthologs
fruit fly all
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Genomic context

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See Pgant1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825289.1 (12260989..12264633, complement)

NW_020825289.1Genomic Context describing neighboring genes Neighboring gene nose resistant to fluoxetine protein 6 Neighboring gene Kinesin heavy chain 73 Neighboring gene uncharacterized LOC6602110 Neighboring gene uncharacterized LOC6602109

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825289 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1
Names
Dper\GL20074
Dper\GL20074-PA
dper_GLEANR_22425

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825289.1 Reference DperRS2

    Range
    12260989..12264633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002027089.2 → XP_002027125.1  polypeptide N-acetylgalactosaminyltransferase 1

    See identical proteins and their annotated locations for XP_002027125.1

    UniProtKB/TrEMBL
    B4H8E6
    Related
    XP_002027125.1, XM_002027089.2
    Conserved Domains (4) summary
    cd02510
    Location:148 → 457
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:144 → 454
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:477 → 595
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:470 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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