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LOC6600865 potassium channel subfamily K member 18 [ Drosophila persimilis ]

Gene ID: 6600865, updated on 10-May-2024

Summary

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Gene symbol
LOC6600865
Gene description
potassium channel subfamily K member 18
Locus tag
Dper_GL10149
See related
EnsemblRapid:LOC6600865
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL10149; GL10150; GL10149-PA; GL10150-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6600865 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825289.1 (20532713..20540746)

NW_020825289.1Genomic Context describing neighboring genes Neighboring gene trehalase Neighboring gene Rab GTPase-binding effector protein rabaptin-5 Neighboring gene Tub domain-containing protein ktub Neighboring gene glycerophosphocholine phosphodiesterase GPCPD1 Neighboring gene Transmembrane O-mannosyltransferase targeting cadherins 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825289 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables potassium ion leak channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stabilization of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium channel subfamily K member 18; uncharacterized protein LOC6600865
Names
Dper\GL10149
Dper\GL10149-PA
Dper\GL10150
Dper\GL10150-PA
dper_GLEANR_10209
dper_GLEANR_10210

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825289.1 Reference DperRS2

    Range
    20532713..20540746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026986066.1 → XP_026841867.1  potassium channel subfamily K member 18 isoform X2

    Related
    XP_026841867.1, XM_026986066.1
    Conserved Domains (1) summary
    pfam07885
    Location:205 → 262
    Ion_trans_2; Ion channel

  2. XM_002025864.2 → XP_002025900.1  uncharacterized protein LOC6600865 isoform X1

    See identical proteins and their annotated locations for XP_002025900.1

    UniProtKB/TrEMBL
    B4H4X1
    Related
    XP_002025900.1, XM_002025864.2
    Conserved Domains (3) summary
    pfam00520
    Location:801 → 850
    Ion_trans; Ion transport protein
    pfam07885
    Location:623 → 679
    Ion_trans_2; Ion channel
    cl23765
    Location:162 → 245
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
Nucleotide Protein
Heading Accession and Version

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