U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pgant6 Polypeptide N-Acetylgalactosaminyltransferase 6 [ Drosophila persimilis ]

Gene ID: 6599609, updated on 23-May-2024

Summary

Go to the top of the page Help
Gene symbol
Pgant6
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 6
Locus tag
Dper_GL22638
See related
EnsemblRapid:LOC6599609
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL22638; GL22638-PA
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Pgant6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825367.1 (30481..33591, complement)

NW_020825367.1Genomic Context describing neighboring genes Neighboring gene Ten-Eleven Translocation (TET) family protein Neighboring gene mitochondrial ribosomal protein S35 Neighboring gene pyridoxal kinase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020825367 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
N-acetylgalactosaminyltransferase 6
Names
Dper\GL22638
Dper\GL22638-PA
dper_GLEANR_4872

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825367.1 Reference DperRS2

    Range
    30481..33591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002024729.2 → XP_002024765.1  N-acetylgalactosaminyltransferase 6

    See identical proteins and their annotated locations for XP_002024765.1

    UniProtKB/TrEMBL
    B4H1N6
    Related
    XP_002024765.1, XM_002024729.2
    Conserved Domains (4) summary
    cd02510
    Location:213 → 511
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1216
    Location:210 → 461
    GT2; Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]
    cd00161
    Location:529 → 656
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:527 → 654
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials