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TH1 negative elongation factor complex member TH1 [ Drosophila persimilis ]

Gene ID: 6599423, updated on 15-May-2024

Summary

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Gene symbol
TH1
Gene description
negative elongation factor complex member TH1
Locus tag
Dper_GL15890
See related
EnsemblRapid:LOC6599423
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL15890; GL15890-PA
Orthologs
fruit fly all
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Genomic context

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See TH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825331.1 (1323378..1325596, complement)

NW_020825331.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6599352 Neighboring gene trimeric intracellular cation channel type 1B.1 Neighboring gene probable phospholipid-transporting ATPase IF Neighboring gene probable phospholipid-transporting ATPase IF

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825331 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NELF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
negative elongation factor D
Names
Dper\GL15890
Dper\GL15890-PA
dper_GLEANR_17350

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825331.1 Reference DperRS2

    Range
    1323378..1325596 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026991318.1 → XP_026847119.1  negative elongation factor D

    UniProtKB/TrEMBL
    B4H0Z8
    Related
    XP_026847119.1, XM_026991318.1
    Conserved Domains (1) summary
    pfam04858
    Location:2 → 576
    TH1; TH1 protein
Nucleotide Protein
Heading Accession and Version

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