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LOC6598968 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P [ Drosophila persimilis ]

Gene ID: 6598968, updated on 10-May-2024

Summary

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Gene symbol
LOC6598968
Gene description
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P
Locus tag
Dper_GL22838
See related
EnsemblRapid:LOC6598968
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL22838; GL22838-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6598968 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825340.1 (1655393..1677318)

NW_020825340.1Genomic Context describing neighboring genes Neighboring gene procollagen lysyl hydroxylase Neighboring gene immunoglobulin domain-containing protein oig-4 Neighboring gene contactin-4 Neighboring gene inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B Neighboring gene aarF domain containing kinase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825340 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P
Names
Dper\GL22838
Dper\GL22838-PA
dper_GLEANR_5085

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825340.1 Reference DperRS2

    Range
    1655393..1677318
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026992037.1 → XP_026847838.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P isoform X1

    UniProtKB/TrEMBL
    B4GZM7
    Related
    XP_026847838.1, XM_026992037.1
    Conserved Domains (1) summary
    cd00218
    Location:223 → 444
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

  2. XM_002024020.2 → XP_002024056.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P isoform X1

    See identical proteins and their annotated locations for XP_002024056.1

    UniProtKB/TrEMBL
    B4GZM7
    Related
    XP_002024056.1, XM_002024020.2
    Conserved Domains (1) summary
    cd00218
    Location:223 → 444
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

  3. XM_026992038.1 → XP_026847839.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P isoform X2

    Related
    XP_026847839.1, XM_026992038.1
    Conserved Domains (1) summary
    cd00218
    Location:71 → 292
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
Heading Accession and Version

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