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LOC6597471 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Drosophila persimilis ]

Gene ID: 6597471, updated on 10-May-2024

Summary

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Gene symbol
LOC6597471
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Locus tag
Dper_GL14674
See related
EnsemblRapid:LOC6597471
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL14674; GL14674-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6597471 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825361.1 (141729..143370)

NW_020825361.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6597466 Neighboring gene myotrophin Neighboring gene nuclear pore complex protein Nup50 Neighboring gene Rho GTPase activating protein at 18B Neighboring gene putative uncharacterized protein DDB_G0279653

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825361 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Names
Dper\GL14674
Dper\GL14674-PA
dper_GLEANR_15479

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825361.1 Reference DperRS2

    Range
    141729..143370
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026993479.1 → XP_026849280.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

    Related
    XP_026849280.1, XM_026993479.1
    Conserved Domains (1) summary
    cl21608
    Location:101 → 233
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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