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LOC6591248 GDP-fucose protein O-fucosyltransferase 1 [ Drosophila persimilis ]

Gene ID: 6591248, updated on 10-May-2024

Summary

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Gene symbol
LOC6591248
Gene description
GDP-fucose protein O-fucosyltransferase 1
Locus tag
Dper_GL11249
See related
EnsemblRapid:LOC6591248
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila persimilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GL11249; GL11249-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6591248 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825289.1 (5641196..5642659)

NW_020825289.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase pea Neighboring gene cytochrome c oxidase assembly factor 5 Neighboring gene transmembrane protein 39A Neighboring gene cysteine--tRNA ligase-like protein, mitochondrial Neighboring gene eukaryotic translation initiation factor 3 subunit M Neighboring gene DNA excision repair protein Ercc1 Neighboring gene cytosolic iron-sulfur assembly component 1 Neighboring gene Hermansky-Pudlak syndrome 1 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825289 Unplaced Scaffold Reference DperRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1
Names
Dper\GL11249
Dper\GL11249-PA
dper_GLEANR_11392

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DperRS2

Genomic

  1. NW_020825289.1 Reference DperRS2

    Range
    5641196..5642659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026985849.1 → XP_026841650.1  GDP-fucose protein O-fucosyltransferase 1

    UniProtKB/TrEMBL
    B4GDM4
    Related
    XP_026841650.1, XM_026985849.1
    Conserved Domains (1) summary
    cd11302
    Location:28 → 388
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
Nucleotide Protein
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