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LOC6570736 beta-1,4-galactosyltransferase 7 [ Drosophila grimshawi ]

Gene ID: 6570736, updated on 10-May-2024

Summary

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Gene symbol
LOC6570736
Gene description
beta-1,4-galactosyltransferase 7
Locus tag
Dgri_GH22239
See related
EnsemblRapid:LOC6570736
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH22239; GH22239-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6570736 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (16934777..16936013, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961964.1 (1982..3218)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene Smg6 nonsense mediated mRNA decay factor Neighboring gene Nuclear hormone receptor HR96 Neighboring gene nucleolar protein 12 Neighboring gene ER membrane protein complex subunit 6 Neighboring gene putative transferase CAF17, mitochondrial Neighboring gene cysteine-rich DPF motif domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7
Names
Dgri\GH22239
Dgri\GH22239-PA
dgri_GLEANR_6394

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    16934777..16936013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001996913.2 → XP_001996949.2  beta-1,4-galactosyltransferase 7

    UniProtKB/TrEMBL
    B4K0Z5
    Related
    XP_001996949.2, XM_001996913.2
    Conserved Domains (1) summary
    cd00899
    Location:65 → 289
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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