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ninaB neither inactivation nor afterpotential B [ Drosophila grimshawi ]

Gene ID: 6569858, updated on 15-May-2024

Summary

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Gene symbol
ninaB
Gene description
neither inactivation nor afterpotential B
Locus tag
Dgri_GH14266
See related
EnsemblRapid:LOC6569858
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH14266; GH14266-PA
Orthologs
fruit fly all
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Genomic context

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See ninaB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (28455603..28458505, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961683.1 (2535410..2538250)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene low molecular weight phosphotyrosine protein phosphatase 1 Neighboring gene Adenosine deaminase-related growth factor C Neighboring gene Adenosine deaminase-related growth factor D Neighboring gene leucine-rich repeat-containing protein 40 Neighboring gene cilia- and flagella-associated protein 36 Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 3 flfl

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase
Names
Dgri\GH14266
Dgri\GH14266-PA
dgri_GLEANR_14155

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    28455603..28458505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001995985.3 → XP_001996021.1  carotenoid isomerooxygenase

    See identical proteins and their annotated locations for XP_001996021.1

    UniProtKB/TrEMBL
    B4JYB7
    Related
    XP_001996021.1, XM_001995985.3
    Conserved Domains (1) summary
    pfam03055
    Location:52 → 606
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein
Heading Accession and Version

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