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LOC6569785 putative polypeptide N-acetylgalactosaminyltransferase 13 [ Drosophila grimshawi ]

Gene ID: 6569785, updated on 10-May-2024

Summary

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Gene symbol
LOC6569785
Gene description
putative polypeptide N-acetylgalactosaminyltransferase 13
Locus tag
Dgri_GH14160
See related
EnsemblRapid:LOC6569785
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH14160; GH14160-PA
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (30959810..30962749, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961683.1 (46480..49419)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6569724 Neighboring gene Allatostatin A receptor 2 Neighboring gene secreted RxLR effector protein 161-like Neighboring gene uncharacterized LOC122322508

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 13
Names
Dgri\GH14160
Dgri\GH14160-PA
dgri_GLEANR_14057

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    30959810..30962749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001995793.2 → XP_001995829.2  putative polypeptide N-acetylgalactosaminyltransferase 13

    UniProtKB/TrEMBL
    B4JXS5
    Related
    XP_001995829.2, XM_001995793.2
    Conserved Domains (2) summary
    cd02510
    Location:109 → 420
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:427 → 513
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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