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twisted Protein O-mannosyl-transferase 2 [ Drosophila grimshawi ]

Gene ID: 6569487, updated on 24-May-2024

Summary

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Gene symbol
twisted
Gene description
Protein O-mannosyl-transferase 2
Locus tag
Dgri_GH17663
See related
EnsemblRapid:LOC6569487
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH17663; GH17663-PA
Orthologs
fruit fly all
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Genomic context

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See twisted in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063692.1 (1852598..1856595, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961682.1 (1828254..1832251, complement)

NW_025063692.1Genomic Context describing neighboring genes Neighboring gene homeobox protein 5 Neighboring gene uncharacterized LOC6569486 Neighboring gene frizzled-3 Neighboring gene ubiquitin specific protease 16/45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 2
Names
Dgri\GH17663
Dgri\GH17663-PA
dgri_GLEANR_2069

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063692.1 Reference ASM1815329v1

    Range
    1852598..1856595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001995587.2 → XP_001995623.1  protein O-mannosyl-transferase 2

    See identical proteins and their annotated locations for XP_001995623.1

    UniProtKB/TrEMBL
    B4JWZ9
    Related
    XP_001995623.1, XM_001995587.2
    Conserved Domains (4) summary
    smart00472
    Location:381 → 436
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:37 → 749
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:41 → 286
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:514 → 747
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
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