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Pgant9 polypeptide N-acetylgalactosaminyltransferase 9 [ Drosophila grimshawi ]

Gene ID: 6569052, updated on 22-May-2024

Summary

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Gene symbol
Pgant9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
Locus tag
Dgri_GH22705
See related
EnsemblRapid:LOC6569052
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH22705; GH22705-PA
Orthologs
fruit fly all
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Genomic context

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See Pgant9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062889.1 (564508..641962)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961681.1 (3390581..3468427, complement)

NW_025062889.1Genomic Context describing neighboring genes Neighboring gene kinesin family member unc-104 Neighboring gene accessory gland protein Acp62F Neighboring gene uncharacterized LOC6569055 Neighboring gene Imaginal disc growth factor 6 Neighboring gene trypsin-1 Neighboring gene cilia- and flagella-associated protein 161

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 9
Names
Dgri\GH22705
Dgri\GH22705-PA
dgri_GLEANR_7036

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062889.1 Reference ASM1815329v1

    Range
    564508..641962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032741169.2 → XP_032597060.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    UniProtKB/TrEMBL
    B4JWN6
    Related
    XP_032597060.1, XM_032741169.2
    Conserved Domains (2) summary
    cd02510
    Location:222 → 519
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:530 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_032741170.2 → XP_032597061.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

    UniProtKB/TrEMBL
    B4JWN6
    Related
    XP_032597061.1, XM_032741170.2
    Conserved Domains (2) summary
    cd02510
    Location:222 → 519
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:530 → 646
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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