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PIG-M Phosphatidylinositol glycan anchor biosynthesis class M [ Drosophila grimshawi ]

Gene ID: 6568907, updated on 16-May-2024

Summary

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Gene symbol
PIG-M
Gene description
Phosphatidylinositol glycan anchor biosynthesis class M
Locus tag
Dgri_GH23154
See related
EnsemblRapid:LOC6568907
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH23154; GH23154-PA
Orthologs
fruit fly all
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Genomic context

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See PIG-M in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062826.1 (85202..86637, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961681.1 (4831119..4832570)

NW_025062826.1Genomic Context describing neighboring genes Neighboring gene Poly(A) binding protein interacting protein 1 Neighboring gene Eps15 homology domain containing protein-binding protein 1 Neighboring gene uncharacterized LOC116805886 Neighboring gene cx9C motif-containing protein 4 Neighboring gene uncharacterized LOC6568906 Neighboring gene negative cofactor 2 alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1
Names
Dgri\GH23154
Dgri\GH23154-PA
dgri_GLEANR_7444

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062826.1 Reference ASM1815329v1

    Range
    85202..86637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001995394.3 → XP_001995430.2  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    B4JVN4
    Related
    XP_001995430.2, XM_001995394.3
    Conserved Domains (1) summary
    cl21590
    Location:166 → 436
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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