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Alg13 Alg13 UDP-N-acetylglucosaminyltransferase subunit [ Drosophila grimshawi ]

Gene ID: 6568573, updated on 23-May-2024

Summary

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Gene symbol
Alg13
Gene description
Alg13 UDP-N-acetylglucosaminyltransferase subunit
Locus tag
Dgri_GH13947
See related
EnsemblRapid:LOC6568573
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH13947; GH13947-PA
Orthologs
fruit fly all
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Genomic context

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See Alg13 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (22057845..22058449)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961680.1 (4744247..4744851, complement)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene UDP-xylose and UDP-N-acetylglucosamine transporter Neighboring gene Suppressor of ER stress-induced death Neighboring gene V-type ATPase subunit a family protein Vha100-1 Neighboring gene cubilin Neighboring gene uncharacterized LOC116805833

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine transferase subunit ALG13 homolog
Names
Dgri\GH13947
Dgri\GH13947-PA
dgri_GLEANR_1386

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    22057845..22058449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001994790.2 → XP_001994826.2  UDP-N-acetylglucosamine transferase subunit ALG13 homolog

    UniProtKB/TrEMBL
    B4JTM6
    Related
    XP_001994826.2, XM_001994790.2
    Conserved Domains (1) summary
    pfam04101
    Location:31 → 188
    Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain
Nucleotide Protein
Heading Accession and Version

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