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LOC6567946 O-glucosyltransferase rumi [ Drosophila grimshawi ]

Gene ID: 6567946, updated on 7-Dec-2023

Summary

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Gene symbol
LOC6567946
Gene description
O-glucosyltransferase rumi
Locus tag
Dgri_GH18344
See related
EnsemblRapid:LOC6567946
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH18344; GH18344-PA
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Genomic context

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See LOC6567946 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (17508516..17510536)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961679.1 (3374057..3376081, complement)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene Ubiquitin-specific protease 12/46 Neighboring gene membrane metallo-endopeptidase-like 1 Neighboring gene neprilysin-1 Neighboring gene E3 ubiquitin-protein ligase RNF4 Neighboring gene uncharacterized LOC116805752 Neighboring gene vesicle transport protein Sec20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi
Names
Dgri\GH18344
Dgri\GH18344-PA
dgri_GLEANR_273

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    17508516..17510536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001993898.3 → XP_001993934.1  O-glucosyltransferase rumi

    See identical proteins and their annotated locations for XP_001993934.1

    UniProtKB/TrEMBL
    B4JSD0
    Related
    XP_001993934.1, XM_001993898.3
    Conserved Domains (1) summary
    cl23835
    Location:68 → 400
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
Heading Accession and Version

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