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Stt3A catalytic subunit 3A of the oligosaccharyltransferase complex [ Drosophila grimshawi ]

Gene ID: 6564779, updated on 15-May-2024

Summary

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Gene symbol
Stt3A
Gene description
catalytic subunit 3A of the oligosaccharyltransferase complex
Locus tag
Dgri_GH12900
See related
EnsemblRapid:LOC6564779
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH12900; GH12900-PA
Orthologs
fruit fly all
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Genomic context

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See Stt3A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063692.1 (15012616..15016433, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961676.1 (11314827..11318649)

NW_025063692.1Genomic Context describing neighboring genes Neighboring gene stomatin-4 Neighboring gene Ionotropic receptor 21a Neighboring gene small nucleolar RNA Me28S-U3344 Neighboring gene small nucleolar RNA Me28S-U3344 Neighboring gene blood vessel epicardial substance Neighboring gene uncharacterized LOC6564778 Neighboring gene uncharacterized LOC6564776

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
Names
Dgri\GH12900
Dgri\GH12900-PA
dgri_GLEANR_12803

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063692.1 Reference ASM1815329v1

    Range
    15012616..15016433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001991831.3 → XP_001991867.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

    See identical proteins and their annotated locations for XP_001991867.1

    UniProtKB/TrEMBL
    B4JIP5
    Related
    XP_001991867.1, XM_001991831.3
    Conserved Domains (2) summary
    COG1287
    Location:26 → 718
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
    pfam02516
    Location:28 → 501
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

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