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LOC6564733 N-acetylgalactosaminyltransferase 7 [ Drosophila grimshawi ]

Gene ID: 6564733, updated on 10-May-2024

Summary

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Gene symbol
LOC6564733
Gene description
N-acetylgalactosaminyltransferase 7
Locus tag
Dgri_GH12336
See related
EnsemblRapid:LOC6564733
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH12336; GH12336-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6564733 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062489.1 (921198..926173, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961676.1 (1161145..1166120, complement)

NW_025062489.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6564731 Neighboring gene uncharacterized LOC6564732 Neighboring gene scoloptoxin SSD14 Neighboring gene uncharacterized LOC122322557 Neighboring gene uncharacterized LOC6570901 Neighboring gene histidine--tRNA ligase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
Dgri\GH12336
Dgri\GH12336-PA
dgri_GLEANR_12238

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062489.1 Reference ASM1815329v1

    Range
    921198..926173 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032738045.1 → XP_032593936.1  N-acetylgalactosaminyltransferase 7

    UniProtKB/TrEMBL
    B4JJ43
    Related
    XP_032593936.1, XM_032738045.1
    Conserved Domains (2) summary
    cd02510
    Location:145 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:468 → 582
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_001990935.2 → XP_001990971.1  N-acetylgalactosaminyltransferase 7

    See identical proteins and their annotated locations for XP_001990971.1

    UniProtKB/TrEMBL
    B4JJ43
    Related
    XP_001990971.1, XM_001990935.2
    Conserved Domains (2) summary
    cd02510
    Location:145 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:468 → 582
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_032738044.1 → XP_032593935.1  N-acetylgalactosaminyltransferase 7

    UniProtKB/TrEMBL
    B4JJ43
    Related
    XP_032593935.1, XM_032738044.1
    Conserved Domains (2) summary
    cd02510
    Location:145 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:468 → 582
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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