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CtBP C-terminal binding protein [ Drosophila grimshawi ]

Gene ID: 6563803, updated on 23-May-2024

Summary

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Gene symbol
CtBP
Gene description
C-terminal binding protein
Locus tag
Dgri_GH18368
See related
EnsemblRapid:LOC6563803
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
CtBP-PA; GH18368; Dgri\CtBP; GH18368-PA
Orthologs
fruit fly all
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Genomic context

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See CtBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (6547064..6560857)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961675.1 (6584875..6598264, complement)

NW_025063098.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6563806 Neighboring gene protein MEMO1 Neighboring gene uncharacterized LOC6563805 Neighboring gene traB domain-containing protein Neighboring gene uncharacterized LOC116805489 Neighboring gene lethal (3) 87Df

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developmental expression and phylogenetic conservation of alternatively spliced forms of the C-terminal binding protein corepressor. Mani-Telang P, et al. Dev Genes Evol, 2007 Feb. PMID 17120023, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein
Names
Dgri\CtBP-PA
Dgri\GH18368
Dgri\GH18368-PA
dgri_GLEANR_2751

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063098.1 Reference ASM1815329v1

    Range
    6547064..6560857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043215184.1 → XP_043071119.1  C-terminal-binding protein isoform X7

    Related
    XP_043071119.1, XM_043215184.1

  2. XM_032737665.2 → XP_032593556.1  C-terminal-binding protein isoform X4

    Related
    XP_032593556.1, XM_032737665.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 342
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_043215185.1 → XP_043071120.1  C-terminal-binding protein isoform X9

    Related
    XP_043071120.1, XM_043215185.1

  4. XM_032737663.2 → XP_032593554.1  C-terminal-binding protein isoform X2

    Related
    XP_032593554.1, XM_032737663.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 342
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_032737668.2 → XP_032593559.1  C-terminal-binding protein isoform X9

    Related
    XP_032593559.1, XM_032737668.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 342
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. XM_043215183.1 → XP_043071118.1  C-terminal-binding protein isoform X7

    Related
    XP_043071118.1, XM_043215183.1

  7. XM_032737664.2 → XP_032593555.1  C-terminal-binding protein isoform X3

    Related
    XP_032593555.1, XM_032737664.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 345
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  8. XM_032737662.2 → XP_032593553.1  C-terminal-binding protein isoform X1

    Related
    XP_032593553.1, XM_032737662.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 345
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  9. XM_001990152.3 → XP_001990188.1  C-terminal-binding protein isoform X5

    See identical proteins and their annotated locations for XP_001990188.1

    UniProtKB/TrEMBL
    B4JEW9
    Related
    XP_001990188.1, XM_001990152.3
    Conserved Domains (2) summary
    COG1052
    Location:45 → 354
    LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:28 → 345
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  10. XM_032737666.2 → XP_032593557.1  C-terminal-binding protein isoform X6

    Related
    XP_032593557.1, XM_032737666.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 342
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  11. XM_032737667.2 → XP_032593558.1  C-terminal-binding protein isoform X8

    Related
    XP_032593558.1, XM_032737667.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 345
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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