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Stt3B catalytic subunit 3B of the oligosaccharyltransferase complex [ Drosophila grimshawi ]

Gene ID: 6563781, updated on 16-May-2024

Summary

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Gene symbol
Stt3B
Gene description
catalytic subunit 3B of the oligosaccharyltransferase complex
Locus tag
Dgri_GH19585
See related
EnsemblRapid:LOC6563781
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH19585; GH19585-PA
Orthologs
fruit fly all
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Genomic context

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See Stt3B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063406.1 (630587..635990, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961675.1 (13737278..13742681)

NW_025063406.1Genomic Context describing neighboring genes Neighboring gene homeobox protein Nkx-2.4 Neighboring gene forkhead box P Neighboring gene transforming growth factor beta regulator 1 Neighboring gene zinc finger protein 830 Neighboring gene hydroxypyruvate isomerase-like protein Gip

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
Names
Dgri\GH19585
Dgri\GH19585-PA
dgri_GLEANR_3863

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063406.1 Reference ASM1815329v1

    Range
    630587..635990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001990811.2 → XP_001990847.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

    See identical proteins and their annotated locations for XP_001990847.1

    UniProtKB/TrEMBL
    B4JHS0
    Related
    XP_001990847.1, XM_001990811.2
    Conserved Domains (2) summary
    COG1287
    Location:15 → 732
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
    pfam02516
    Location:18 → 514
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

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