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LOC6561470 beta-1,3-glucosyltransferase [ Drosophila grimshawi ]

Gene ID: 6561470, updated on 10-May-2024

Summary

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Gene symbol
LOC6561470
Gene description
beta-1,3-glucosyltransferase
Locus tag
Dgri_GH10709
See related
EnsemblRapid:LOC6561470
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH10709; GH10709-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6561470 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062900.1 (14398530..14402332)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961674.1 (2912749..2916723, complement)

NW_025062900.1Genomic Context describing neighboring genes Neighboring gene PTPRF interacting protein alpha Neighboring gene phosphatidylinositol-3-phosphate phosphatase Neighboring gene uncharacterized LOC6561361 Neighboring gene ribosomal RNA-processing protein 7 homolog A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-glucosyltransferase
Names
Dgri\GH10709
Dgri\GH10709-PA
dgri_GLEANR_10634

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062900.1 Reference ASM1815329v1

    Range
    14398530..14402332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001988140.3 → XP_001988176.2  beta-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    B4JC30
    Related
    XP_001988176.2, XM_001988140.3
    Conserved Domains (1) summary
    pfam02434
    Location:315 → 521
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials