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LOC6560609 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8 [ Drosophila grimshawi ]

Gene ID: 6560609, updated on 10-May-2024

Summary

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Gene symbol
LOC6560609
Gene description
high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8
Locus tag
Dgri_GH20665
See related
EnsemblRapid:LOC6560609
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH20665; GH20665-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6560609 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062889.1 (8552376..8562337, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961673.1 (4540937..4550388, complement)

NW_025062889.1Genomic Context describing neighboring genes Neighboring gene sulfotransferase 1A3 Neighboring gene sulfotransferase 1 family member D1 Neighboring gene protein dead ringer Neighboring gene aquaporin Neighboring gene aquaporin AQPcic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8
Names
Dgri\GH20665
Dgri\GH20665-PA
dgri_GLEANR_4897

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025062889.1 Reference ASM1815329v1

    Range
    8552376..8562337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032734237.2 → XP_032590128.1  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8 isoform X2

    Related
    XP_032590128.1, XM_032734237.2
    Conserved Domains (2) summary
    pfam00233
    Location:811 → 1051
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam00989
    Location:507 → 598
    PAS; PAS fold

  2. XM_032734235.2 → XP_032590126.1  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8 isoform X1

    Related
    XP_032590126.1, XM_032734235.2
    Conserved Domains (2) summary
    pfam00233
    Location:820 → 1060
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam00989
    Location:507 → 598
    PAS; PAS fold
Nucleotide Protein
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