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LOC6558174 queuine tRNA-ribosyltransferase accessory subunit 2 [ Drosophila grimshawi ]

Gene ID: 6558174, updated on 10-May-2024

Summary

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Gene symbol
LOC6558174
Gene description
queuine tRNA-ribosyltransferase accessory subunit 2
Locus tag
Dgri_GH16210
See related
EnsemblRapid:LOC6558174
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH16210; GH16210-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6558174 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063240.1 (16296893..16298323, complement)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961672.1 (7324715..7326145)

NW_025063240.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6558157 Neighboring gene germinal-center associated nuclear protein Neighboring gene GDP-D-glucose phosphorylase 1 Neighboring gene uncharacterized LOC116806526 Neighboring gene homeobox protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA-guanosine(34) queuine transglycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA-guanine transglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
queuine tRNA-ribosyltransferase accessory subunit 2
Names
Dgri\GH16210
Dgri\GH16210-PA
Queuine tRNA-ribosyltransferase domain-containing protein 1
dgri_GLEANR_15928

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063240.1 Reference ASM1815329v1

    Range
    16296893..16298323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001983986.2 → XP_001984022.1  queuine tRNA-ribosyltransferase accessory subunit 2

    See identical proteins and their annotated locations for XP_001984022.1

    UniProtKB/Swiss-Prot
    B4IXD3
    Related
    XP_001984022.1, XM_001983986.2
    Conserved Domains (1) summary
    pfam01702
    Location:137 → 383
    TGT; Queuine tRNA-ribosyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B4IXD3.1 GenPept UniProtKB/Swiss-Prot:B4IXD3

Gene LinkOut

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Molecular Biology Databases
Research Materials