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sfl N-deacetylase and N-sulfotransferase sfl [ Drosophila grimshawi ]

Gene ID: 6557577, updated on 22-May-2024

Summary

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Gene symbol
sfl
Gene description
N-deacetylase and N-sulfotransferase sfl
Locus tag
Dgri_GH15162
See related
EnsemblRapid:LOC6557577
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila grimshawi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
Also known as
GH15162; GH15162-PA
Orthologs
fruit fly all
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Genomic context

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See sfl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063240.1 (15183845..15206159)
102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961672.1 (8417873..8438484, complement)

NW_025063240.1Genomic Context describing neighboring genes Neighboring gene regulator of MON1-CCZ1 complex protein bulli Neighboring gene vacuolar protein sorting 8 Neighboring gene mitochondrial calcium uniporter Neighboring gene protein javelin Neighboring gene serine protease nudel

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase
Names
Dgri\GH15162
Dgri\GH15162-PA
dgri_GLEANR_14975

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815329v1

Genomic

  1. NW_025063240.1 Reference ASM1815329v1

    Range
    15183845..15206159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043215378.1 → XP_043071313.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    B4IXX1
    Related
    XP_043071313.1, XM_043215378.1
Nucleotide Protein
Heading Accession and Version

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