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LOC6555680 delta-sarcoglycan [ Drosophila erecta ]

Gene ID: 6555680, updated on 10-May-2024

Summary

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Gene symbol
LOC6555680
Gene description
delta-sarcoglycan
Locus tag
Dere_GG12684
See related
EnsemblRapid:LOC6555680
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG12684; GG12684-PA; GG12684-PB
Orthologs
fruit fly all
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Genomic context

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See LOC6555680 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825209.1 (138682..147043, complement)

NW_020825209.1Genomic Context describing neighboring genes Neighboring gene alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial Neighboring gene protein a6 Neighboring gene trypsin-1 Neighboring gene Adenosine deaminase acting on RNA Neighboring gene uncharacterized LOC6555683

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825209 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan
Names
Dere\GG12684
Dere\GG12684-PA
Dere\GG12684-PB
dere_GLEANR_12751

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825209.1 Reference DereRS2

    Range
    138682..147043 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001982504.3 → XP_001982540.1  delta-sarcoglycan

    See identical proteins and their annotated locations for XP_001982540.1

    UniProtKB/TrEMBL
    B3P9L3
    Related
    XP_001982540.1, XM_001982504.3
    Conserved Domains (1) summary
    pfam04790
    Location:158 → 391
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials