U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC6554314 lactosylceramide 4-alpha-galactosyltransferase [ Drosophila erecta ]

Gene ID: 6554314, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC6554314
Gene description
lactosylceramide 4-alpha-galactosyltransferase
Locus tag
Dere_GG11427
See related
EnsemblRapid:LOC6554314
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG11427; GG11427-PA
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC6554314 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825194.1 (6577818..6579315, complement)

NW_020825194.1Genomic Context describing neighboring genes Neighboring gene alpha-taxilin Neighboring gene uncharacterized LOC6554313 Neighboring gene accessory gland-specific peptide 57Db-like Neighboring gene uncharacterized LOC113564867

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020825194 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
Dere\GG11427
Dere\GG11427-PA
dere_GLEANR_11524

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825194.1 Reference DereRS2

    Range
    6577818..6579315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001981709.3 → XP_001981745.2  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    B3P6E5
    Related
    XP_001981745.2, XM_001981709.3
    Conserved Domains (2) summary
    pfam04572
    Location:270 → 396
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:134 → 246
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials