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ttv exostosin glycosyltransferase 1 ttv [ Drosophila erecta ]

Gene ID: 6549168, updated on 23-May-2024

Summary

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Gene symbol
ttv
Gene description
exostosin glycosyltransferase 1 ttv
Locus tag
Dere_GG20465
See related
EnsemblRapid:LOC6549168
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG20465; GG20465-PA; GG20465-PB
Orthologs
fruit fly all
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Genomic context

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See ttv in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (7333319..7394106)

NW_020825207.1Genomic Context describing neighboring genes Neighboring gene Additional sex combs Neighboring gene uncharacterized LOC6549534 Neighboring gene Cuticular protein 51A Neighboring gene uncharacterized LOC6549170 Neighboring gene uncharacterized LOC26526562 Neighboring gene lamin-C Neighboring gene cocaine esterase Neighboring gene RNA polymerase I subunit RpI1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825207 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-1
Names
Dere\GG20465
Dere\GG20465-PA
Dere\GG20465-PB
dere_GLEANR_5260

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825207.1 Reference DereRS2

    Range
    7333319..7394106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001975582.3 → XP_001975618.1  exostosin-1

    See identical proteins and their annotated locations for XP_001975618.1

    UniProtKB/TrEMBL
    B3NR29
    Related
    XP_001975618.1, XM_001975582.3
    Conserved Domains (2) summary
    pfam03016
    Location:102 → 393
    Exostosin; Exostosin family
    pfam09258
    Location:477 → 733
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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