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Gyg glycogenin 1 [ Drosophila erecta ]

Gene ID: 6547671, updated on 8-Oct-2024

Summary

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Gene symbol
Gyg
Gene description
glycogenin 1
Locus tag
Dere_GG22100
See related
EnsemblRapid:LOC6547671
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG22100; GG22100-PA; GG22100-PB; GG22100-PC; GG22100-PD; GG22100-PE; GG22100-PF; GG22100-PG
Orthologs
fruit fly all
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Genomic context

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See Gyg in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (11607151..11617207, complement)

NW_020825207.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase family 49 member C1 Neighboring gene UDP-glycosyltransferase family 49 member B1 Neighboring gene FK506-binding protein 5 Neighboring gene Leucine-rich repeat activity-regulated protein at synapses Neighboring gene maternal protein tudor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825207 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-1
Names
Dere\GG22100
Dere\GG22100-PA
Dere\GG22100-PB
Dere\GG22100-PC
Dere\GG22100-PD
Dere\GG22100-PE
Dere\GG22100-PF
Dere\GG22100-PG
dere_GLEANR_6856

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825207.1 Reference DereRS2

    Range
    11607151..11617207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015156739.2 → XP_015012225.1  glycogenin-1 isoform X6

    UniProtKB/TrEMBL
    A0A0Q5VLD6, A0A0Q5W080
    Related
    XP_015012225.1, XM_015156739.2
    Conserved Domains (2) summary
    cd02537
    Location:5 → 254
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:95 → 252
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  2. XM_015156736.2 → XP_015012222.1  glycogenin-1 isoform X5

    UniProtKB/TrEMBL
    A0A0Q5VLE5, A0A0Q5VMC0
    Related
    XP_015012222.1, XM_015156736.2
    Conserved Domains (2) summary
    cd02537
    Location:4 → 253
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:94 → 251
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  3. XM_026981370.1 → XP_026837171.1  glycogenin-1 isoform X1

    UniProtKB/TrEMBL
    A0A0Q5VTJ2
    Related
    XP_026837171.1, XM_026981370.1
    Conserved Domains (1) summary
    cd02537
    Location:4 → 253
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  4. XM_026981372.1 → XP_026837173.1  glycogenin-1 isoform X3

    UniProtKB/TrEMBL
    A0A0Q5VLE5
    Related
    XP_026837173.1, XM_026981372.1
    Conserved Domains (1) summary
    cd02537
    Location:4 → 253
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  5. XM_015156738.2 → XP_015012224.1  glycogenin-1 isoform X4

    UniProtKB/TrEMBL
    A0A0Q5VLC0, A0A0Q5VLE5
    Related
    XP_015012224.1, XM_015156738.2
    Conserved Domains (2) summary
    cd02537
    Location:5 → 254
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:95 → 252
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

  6. XM_026981371.1 → XP_026837172.1  glycogenin-1 isoform X2

    UniProtKB/TrEMBL
    A0A0Q5VLE5
    Related
    XP_026837172.1, XM_026981371.1
    Conserved Domains (1) summary
    cd02537
    Location:5 → 254
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

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