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Hs3st-A Heparan sulfate 3-O sulfotransferase-A [ Drosophila erecta ]

Gene ID: 6547303, updated on 23-May-2024

Summary

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Gene symbol
Hs3st-A
Gene description
Heparan sulfate 3-O sulfotransferase-A
Locus tag
Dere_GG21921
See related
EnsemblRapid:LOC6547303
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG21921; GG21921-PA
Orthologs
fruit fly all
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Genomic context

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See Hs3st-A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (14041511..14084203, complement)

NW_020825207.1Genomic Context describing neighboring genes Neighboring gene clumping factor A Neighboring gene Cytochrome P450 12b2 Neighboring gene elongation of very long chain fatty acids protein F Neighboring gene elongation of very long chain fatty acids protein F Neighboring gene probable salivary secreted peptide Neighboring gene Lithium-inducible SLC6 transporter Neighboring gene transcription factor grauzone Neighboring gene vacuolar protein sorting 51 Neighboring gene Salt-inducible kinase 3 Neighboring gene uncharacterized LOC26526403

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825207 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal and chromosomal factor
Names
Dere\GG21921
Dere\GG21921-PA
dere_GLEANR_6693

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825207.1 Reference DereRS2

    Range
    14041511..14084203 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001974693.3 → XP_001974729.1  centrosomal and chromosomal factor

    See identical proteins and their annotated locations for XP_001974729.1

    UniProtKB/TrEMBL
    B3NKA7
    Related
    XP_001974729.1, XM_001974693.3
    Conserved Domains (1) summary
    cl21551
    Location:251 → 595
    Sulfotransfer_1; Sulfotransferase domain

RNA

  1. XR_003407952.1 RNA Sequence

    Related
    XR_003407952.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials