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LOC6545124 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Drosophila erecta ]

Gene ID: 6545124, updated on 10-May-2024

Summary

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Gene symbol
LOC6545124
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Locus tag
Dere_GG14746
See related
EnsemblRapid:LOC6545124
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG14746; GG14746-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6545124 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825198.1 (918958..920297)

NW_020825198.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific protease 10 Neighboring gene monocarboxylate transporter 12 Neighboring gene glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 Neighboring gene uncharacterized LOC6545125 Neighboring gene nervous fingers 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825198 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Names
Dere\GG14746
Dere\GG14746-PA
dere_GLEANR_14887

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825198.1 Reference DereRS2

    Range
    918958..920297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001971034.3 → XP_001971070.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_001971070.1

    UniProtKB/TrEMBL
    B3NJD4
    Related
    XP_001971070.1, XM_001971034.3
    Conserved Domains (1) summary
    cl21608
    Location:77 → 227
    Galactosyl_T; Galactosyltransferase

  2. XM_026977671.1 → XP_026833472.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    Related
    XP_026833472.1, XM_026977671.1
    Conserved Domains (1) summary
    cl21608
    Location:77 → 227
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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