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LOC6543130 uncharacterized LOC6543130 [ Drosophila erecta ]

Gene ID: 6543130, updated on 10-May-2024

Summary

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Gene symbol
LOC6543130
Gene description
uncharacterized LOC6543130
Locus tag
Dere_GG10226
See related
EnsemblRapid:LOC6543130
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG10226; GG10226-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6543130 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (12533365..12535591)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6541621 Neighboring gene Radial spoke head protein 1 Neighboring gene Alg7 dolichyl-phosphate N-acetylglucosaminephosphotransferase Neighboring gene sorting nexin-29 Neighboring gene uncharacterized LOC26526261 Neighboring gene Scm-related gene containing four mbt domains

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC6543130
Names
Dere\GG10226
Dere\GG10226-PA
dere_GLEANR_10171

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    12533365..12535591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001969640.3 → XP_001969676.1  uncharacterized protein LOC6543130

    See identical proteins and their annotated locations for XP_001969676.1

    UniProtKB/TrEMBL
    B3N395
    Related
    XP_001969676.1, XM_001969640.3
Nucleotide Protein
Heading Accession and Version

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