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LOC6543072 beta-1,3-galactosyltransferase 6 [ Drosophila erecta ]

Gene ID: 6543072, updated on 10-May-2024

Summary

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Gene symbol
LOC6543072
Gene description
beta-1,3-galactosyltransferase 6
Locus tag
Dere_GG10628
See related
EnsemblRapid:LOC6543072
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG10628; b3galt6; GG10628-PA; beta3galt6
Orthologs
fruit fly all
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Genomic context

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See LOC6543072 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (18435580..18437059)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 15 homolog Neighboring gene nucleoporin GLE1 Neighboring gene vacuolar protein sorting 25 Neighboring gene Calcium-independent receptor for alpha-latrotoxin Neighboring gene fibrinogen-like protein 1 Neighboring gene uncharacterized LOC6543401

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 6
Names
Dere\GG10628
Dere\GG10628-PA
Dere\beta3galt6
Dere\beta3galt6-PA
beta3galt6-PA
dere_GLEANR_10535

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    18435580..18437059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001970401.3 → XP_001970437.1  beta-1,3-galactosyltransferase 6

    See identical proteins and their annotated locations for XP_001970437.1

    UniProtKB/TrEMBL
    Q256Z6
    Related
    XP_001970437.1, XM_001970401.3
    Conserved Domains (1) summary
    cl21608
    Location:128 → 319
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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