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Pgant4 Polypeptide N-Acetylgalactosaminyltransferase 4 [ Drosophila erecta ]

Gene ID: 6542922, updated on 23-May-2024

Summary

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Gene symbol
Pgant4
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 4
Locus tag
Dere_GG24947
See related
EnsemblRapid:LOC6542922
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG24947; GG24947-PA
Orthologs
fruit fly all
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Genomic context

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See Pgant4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (3653882..3656355)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene Pif1 DNA helicase Neighboring gene putative polypeptide N-acetylgalactosaminyltransferase 10 Neighboring gene eukaryotic translation initiation factor 4E binding protein thor Neighboring gene protein transport protein sec31

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 4
Names
Dere\GG24947
Dere\GG24947-PA
dere_GLEANR_9626

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    3653882..3656355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001968533.3 → XP_001968569.1  N-acetylgalactosaminyltransferase 4

    See identical proteins and their annotated locations for XP_001968569.1

    UniProtKB/TrEMBL
    B3N329
    Related
    XP_001968569.1, XM_001968533.3
    Conserved Domains (4) summary
    cd02510
    Location:196 → 495
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1215
    Location:184 → 418
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    cd00161
    Location:513 → 643
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:511 → 641
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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