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Pgant3 Polypeptide N-Acetylgalactosaminyltransferase 3 [ Drosophila erecta ]

Gene ID: 6541899, updated on 24-May-2024

Summary

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Gene symbol
Pgant3
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 3
Locus tag
Dere_GG10775
See related
EnsemblRapid:LOC6541899
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG10775; GG10775-PA
Orthologs
fruit fly all
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Genomic context

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See Pgant3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (19936985..19941205)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene protein late bloomer Neighboring gene protein late bloomer Neighboring gene protein late bloomer Neighboring gene protein late bloomer Neighboring gene protein late bloomer

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3
Names
Dere\GG10775
Dere\GG10775-PA
dere_GLEANR_10669

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    19936985..19941205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001970640.3 → XP_001970676.1  polypeptide N-acetylgalactosaminyltransferase 3

    See identical proteins and their annotated locations for XP_001970676.1

    UniProtKB/TrEMBL
    B3NAI1
    Related
    XP_001970676.1, XM_001970640.3
    Conserved Domains (4) summary
    cd02510
    Location:153 → 457
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:524 → 660
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:517 → 658
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:150 → 386
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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