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LOC6541216 putative polypeptide N-acetylgalactosaminyltransferase 10 [ Drosophila erecta ]

Gene ID: 6541216, updated on 10-May-2024

Summary

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Gene symbol
LOC6541216
Gene description
putative polypeptide N-acetylgalactosaminyltransferase 10
Locus tag
Dere_GG24946
See related
EnsemblRapid:LOC6541216
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG24946; GG24946-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6541216 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (3651371..3653597)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene male-specific lethal 2 Neighboring gene NADH dehydrogenase (ubiquinone) PDSW subunit Neighboring gene Pif1 DNA helicase Neighboring gene Polypeptide N-Acetylgalactosaminyltransferase 4 Neighboring gene eukaryotic translation initiation factor 4E binding protein thor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 10
Names
Dere\GG24946
Dere\GG24946-PA
dere_GLEANR_9625

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    3651371..3653597
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001968532.2 → XP_001968568.1  putative polypeptide N-acetylgalactosaminyltransferase 10

    See identical proteins and their annotated locations for XP_001968568.1

    UniProtKB/TrEMBL
    B3N328
    Related
    XP_001968568.1, XM_001968532.2
    Conserved Domains (4) summary
    cd02510
    Location:180 → 476
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1216
    Location:177 → 497
    GT2; Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]
    cd00161
    Location:494 → 625
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:492 → 624
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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