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Tmtc2 Transmembrane O-mannosyltransferase targeting cadherins 2 [ Drosophila erecta ]

Gene ID: 6540970, updated on 15-May-2024

Summary

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Gene symbol
Tmtc2
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 2
See related
EnsemblRapid:LOC6540970
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Tmtc2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (1071402..1097693)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene Glutamate receptor IIC Neighboring gene tyrosine phosphatase IA-2 Neighboring gene clumping factor B Neighboring gene germinal nascent polypeptide-associated complex alpha subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein CG4341

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    1071402..1097693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026979222.1 → XP_026835023.1  transmembrane and TPR repeat-containing protein CG4341

    Related
    XP_026835023.1, XM_026979222.1
    Conserved Domains (4) summary
    sd00006
    Location:608 → 636
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:272 → 340
    DUF1736; Domain of unknown function (DUF1736)
    cl21590
    Location:110 → 229
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
    cl26002
    Location:575 → 938
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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