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Pgant5 polypeptide N-acetylgalactosaminyltransferase 5 [ Drosophila erecta ]

Gene ID: 6540634, updated on 24-May-2024

Summary

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Gene symbol
Pgant5
Gene description
polypeptide N-acetylgalactosaminyltransferase 5
Locus tag
Dere_GG24317
See related
EnsemblRapid:LOC6540634
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila erecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GG24317; GG24317-PA; GG24317-PB
Orthologs
fruit fly all
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Genomic context

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See Pgant5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825200.1 (5334459..5355549, complement)

NW_020825200.1Genomic Context describing neighboring genes Neighboring gene protein Hook homolog 1 Neighboring gene ribosomal protein L37A Neighboring gene pantothenate kinase 4 Neighboring gene uncharacterized LOC6540642

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020825200 Unplaced Scaffold Reference DereRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 5
Names
Dere\GG24317
Dere\GG24317-PA
Dere\GG24317-PB
dere_GLEANR_9056

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DereRS2

Genomic

  1. NW_020825200.1 Reference DereRS2

    Range
    5334459..5355549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015159619.2 → XP_015015105.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X2

    UniProtKB/TrEMBL
    A0A0Q5W9B4
    Related
    XP_015015105.1, XM_015159619.2
    Conserved Domains (3) summary
    cd02510
    Location:190 → 490
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:503 → 621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:503 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_001968734.3 → XP_001968770.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    See identical proteins and their annotated locations for XP_001968770.1

    UniProtKB/TrEMBL
    B3N4S7
    Related
    XP_001968770.1, XM_001968734.3
    Conserved Domains (3) summary
    cd02510
    Location:190 → 490
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:503 → 621
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:503 → 619
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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